Simon Tournier's projects

You can help free software by supporting freelance developers: for instance, Mathieu focused on maintaining GNU Guix and taking care of the continuous integration (among others). Or by supporting infrastructure maintainers: for instance, the decentralized Mastodon instance Sciences.Re administred by Rémy.



IRC: zimoun @ irc.libera.chat hanging out #guix or #guix-hpc.

Past interests: Scientific tools GetDP (FEM), Gmsh (mesh), Bempp (BEM) and various Krylov solver implementations; to name some. Aside, I have been involved with Colombbus and specifically with Declick; which, among others, is promoting computer sciences in junior secondary school using Free Software.

As an avid Emacs user, I have spent uncountable amount of time tweaking my config, writing emacs-lisp, etc.

And away from keyboard, my list of hiking project is endless, mainly in the The Pyrénées.

Material about Reproducible Research and Guix

A collection of supports (talks, articles or tutorials) where I have been involved. Each item points to both raw slide content and dedicated personal blog post, if any, potentially containing more.

  • 2023
    • Toward practical transparent, verifiable and long-term reproducible research using Guix (post / slides), Seminar Pasteur Institute, Dec.
    • How to make advanced packages (tutorial / slides), Workshop, Nov.
    • co-organized First Workshop on Reproducible Software Environments for Research and High-Performance Computing (website), Nov.
    • co-organized Reproducible Research Hackathon (post / report), May
    • Guix and long term: difficulties and countermeasures (post / slides / video), Café Guix, Mar.
    • Functional programming paradigm applied to package management: toward reproducible computational environment (post / slides / video), IRILL, Feb.
    • GNU Guix and Open science, a crush? (post / slides / video), Declarative and Minimalistic Computing devroom, FOSDEM, Feb.
    • Guix, toward practical transparent, verifiable and long-term reproducible research (post / slides / video), Open Research Tools and Technology devroom, FOSDEM, Feb.
  • 2022
    • Toward practical transparent, verifiable and long-term reproducible research using Guix (post / slides), Seminar Biology Institute of École Normale Supérieur (IBENS), Dec.
    • Reproducible deployment for scientific software using GNU Guix (slides / tutorial / repository) together with Ludovic Courtès and Konrad Hinsen, Open Science Days, Univ. Grenoble, Dec.
    • Introduction to Scheme/Guile, unwrap what’s in package (post / slides / video), Café Guix, Nov.
    • GNU Guix, environnements reproductibles au delà des conteneurs ? (post / slides), Capitole du Libre, Nov.
    • GNU Guix, vers la reproductibilité computationnelle ? (post / slides), BlueHats day in Open Source Experience, Nov.
    • Toward practical transparent verifiable and long-term reproducible research using Guix (paper), Nature Scientific Data, vol. 9, num. 597, Oct.
    • co-organized Ten Years of Guix (website), Workshop, Sept.
    • Comment avoir plus de paquets pour Guix ? (post / slides), Café Guix, Jul.
    • Reproductibilité des environnements logiciels une solution avec GNU Guix ? (post / slides), Workshop INRAe, Jun.
    • Reproductibilité des environnements logiciels avec GNU Guix (post / slides / notes / repository / video) Journées Réseaux de l'Enseignement et de la Recherche (JRES), May
    • Comment refaire plus tard et là-bas ce qui a été fait aujourd’hui et ici ? (post / slides), Café Guix, Mar.
  • 2021
    • Computational reproducibility with GNU Guix: application to multiparametric cytometry (post / slides), Seminar iPOPup, Univ. Paris Cité, Sept.
    • co-organized Workshop on Software Reproducible Environment (website), May
  • 2020
    • co-organized Online Guix Day Conference (website), Nov.
    • co-organized Reproducible Research Hackathon (report), Jul.
  • 2019
    • GNU Guix: vers la reproductibilité computationnelle (post / slides), BlueHats day in Paris Open Source Summit, Dec.

I do not maintain the list of blog posts here or there where I made contributions. Let only mention Guix-HPC activity report for the years: 2019, 2020, 2021, 2022.

Extended list of publications

In case you would like to know more about my interests or past projects, please give a look to aggregators as HAL or ORCID 0000-0002-2639-818X.

© 2014-2024 Simon Tournier <simon (at) tournier.info >

(last update: 2024-04-12 Fri 20:39)